species:   Bodot
pid:       PID1080
parent:    Bd-milR33
paralog:   
locus:     SACU01000009.1:664418-664498
matures:   ['CUGGGUGGGCGGGAUUCCUG', 'GGGGCUUUCGCUUUUCCAGGU']
srr:       SRR8374849
genome:    /Users/jax/+Genomes/Fungal_genomes/Bodot.GCA_011064635.1_ASM1106463v1_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Hu2019-my.SRR8374849.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Hu2019-my.SRR8374849.cram SACU01000009.1:664418-664498

0 out of bounds
8 alignments
8 proper strand
7 stranded perfect matches

        ***************************     ****************************             
UCUACAAAGCCUGGGUGGGCGGGAUUCCUGUGUCUCAUGAACGCGCAGGGGCUUUCGCUUUUCCAGGUAUGUUUUUGUUGU
...((((((((((((.(((((((((((((((((.........))))))))).)))))))).))))))).....)))))...
----------CUGGGUGGGCGGGAUUCCUG--------------------------------------------------- l=20 a=0 c
-----------------------------------------------GGGGCUUUCGCUUUUCCAGGU------------- l=21 a=0 c*
----------CUGGGUGGGCGGGAUUCCUGUGUCU---------------------------------------------- l=25 a=3 ma
------------------------------------------GCGCAGGGGCUUUCGCUUUUCCAGGU------------- l=26 a=0 ma*

-----------UGGGUGGGCGGGAUUCCUGUGUC----------------------------------------------- l=23 a=1 
----------CUGGGUGGGCGGGAUUCC----------------------------------------------------- l=18 a=1 
----------CUGGGUGGGCGGGAUUCa----------------------------------------------------- l=18 a=1 
----------CUGGGUGGGCGGGAUUCCUGU-------------------------------------------------- l=21 a=1 
----------CUGGGUGGGCGGGAUUCCUGUGUC----------------------------------------------- l=24 a=1 
----------CUGGGUGGGCGGGAUUCCUGUGUCU---------------------------------------------- l=25 a=3 (ma)

mb-01011
ax-1011001
ku-01
ss-101011111110
fn-111
